Here is the list of the major stuff I've done on the car. Links are to assist you with these things. A lot of things aren't on here, such as two swaps, and many more.

Repalcement of almost all oil seals and gaskets.
Brake master cylinder rebuild.
exhaust manifold - 1-14-02

The following were done using the writeups on Pad and Wheels.
Caliper rebuild
Clutch slave and master rebuilds
Oil cooler hoses
TPS Adjustment

There are many other writeups on that site to help with many tasks on the mr2, thanks to EricS.